Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | NCTC13639_05649 | Not Available | Positive | 5235142 - 5236623 | 55124.8 |
| atp-dependent dna helicase | NCTC13639_05650 | Not Available | Negative | 5236671 - 5238692 | 77061.6 |
| peptidyl-prolyl cis-trans isomerase c | NCTC13639_05651 | Not Available | Positive | 5238777 - 5239058 | 10218.6 |
| ketol-acid reductoisomerase | NCTC13639_05652 | Not Available | Negative | 5239178 - 5240653 | 54054.1 |
| lysr family transcriptional regulator | NCTC13639_05653 | Not Available | Positive | 5240818 - 5241720 | 33495.6 |
| putative reductase xoo0026 | NCTC13639_05654 | Not Available | Positive | 5241893 - 5243086 | 43434.7 |
| threonine dehydratase | NCTC13639_05655 | Not Available | Negative | 5243150 - 5244694 | 56152.5 |
| dihydroxy-acid dehydratase | NCTC13639_05656 | Not Available | Negative | 5244700 - 5245086 | 13497.1 |
| dihydroxy-acid dehydratase | NCTC13639_05657 | Not Available | Negative | 5245052 - 5246551 | 53386.0 |
| branched-chain amino acid aminotransferase | NCTC13639_05658 | Not Available | Negative | 5246612 - 5247184 | 20476.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

