Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative udp-n-acetyl-d-mannosaminuronic acid transferase | NCTC13639_05632 | Not Available | Negative | 5218626 - 5219366 | 27830.7 |
| putative common antigen polymerase | NCTC13639_05633 | Not Available | Negative | 5219366 - 5220721 | 51678.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5220759 - 5220873 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 5220973 - 5223877 | Not Available |
| 4-alpha-l-fucosyltransferase | NCTC13639_05634 | Not Available | Negative | 5220718 - 5221797 | 40539.4 |
| lipid iii flippase | NCTC13639_05635 | Not Available | Negative | 5221794 - 5223044 | 44946.2 |
| tdp-4-oxo-6-deoxy-d-glucose transaminase | NCTC13639_05636 | Not Available | Negative | 5223046 - 5223594 | 21260.5 |
| tdp-4-oxo-6-deoxy-d-glucose transaminase | NCTC13639_05637 | Not Available | Negative | 5223554 - 5224177 | 22437.1 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 5224258 - 5225786 | Not Available |
| tdp-fucosamine acetyltransferase | NCTC13639_05638 | Not Available | Negative | 5224182 - 5224859 | 24531.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

