Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen deaminase | NCTC13639_05620 | Not Available | Positive | 5211874 - 5212350 | 17150.0 |
| porphobilinogen deaminase | NCTC13639_05621 | Not Available | Positive | 5212299 - 5212835 | 19043.0 |
| uroporphyrinogen-iii synthase | NCTC13639_05622 | Not Available | Positive | 5212832 - 5213572 | 27717.2 |
| uroporphyrinogen-iii c-methyltransferase | NCTC13639_05623 | Not Available | Positive | 5213594 - 5214769 | 42475.6 |
| putative protoheme ix biogenesis protein | NCTC13639_05624 | Not Available | Positive | 5214772 - 5215971 | 45362.8 |
| Trna-pro | Not Available | Not Available | Positive | 5216426 - 5216502 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 5216545 - 5216631 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 5216652 - 5216727 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5216784 - 5216860 | Not Available |
| putative transport protein yifk | NCTC13639_05631 | Not Available | Negative | 5216963 - 5218348 | 50285.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

