Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sugar phosphatase | NCTC13639_05600 | Not Available | Negative | 5192697 - 5193497 | 29579.2 |
| lysophospholipase l2 | NCTC13639_05601 | Not Available | Negative | 5193513 - 5194022 | 19316.0 |
| lysophospholipase l2 | NCTC13639_05602 | Not Available | Negative | 5193976 - 5194530 | 21164.0 |
| homoserine/homoserine lactone efflux protein | NCTC13639_05603 | Not Available | Positive | 5194641 - 5195261 | 22273.8 |
| transposase | NCTC13639_05604 | Not Available | Positive | 5195424 - 5196308 | 33537.9 |
| threonine efflux system | NCTC13639_05605 | Not Available | Negative | 5196347 - 5196967 | 22494.3 |
| atp-dependent dna helicase recq | NCTC13639_05606 | Not Available | Negative | 5197031 - 5198845 | 67997.6 |
| phospholipase a | NCTC13639_05607 | Not Available | Negative | 5198949 - 5199818 | 33008.7 |
| uncharacterized protein, possibly involved in aromatic compounds catabolism | NCTC13639_05608 | Not Available | Positive | 5199984 - 5200451 | 17135.7 |
| putative chloramphenical resistance permease rard | NCTC13639_05609 | Not Available | Positive | 5200504 - 5201397 | 33219.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

