Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ubiquinone biosynthesis protein ubib | NCTC13639_05590 | Not Available | Negative | 5181815 - 5183455 | 63424.6 |
| uncharacterized protein conserved in bacteria | NCTC13639_05591 | Not Available | Negative | 5183452 - 5183886 | 16006.1 |
| ubiquinone/menaquinone biosynthesis methyltransferase | NCTC13639_05592 | Not Available | Negative | 5184072 - 5184827 | 28041.7 |
| dna recombination protein rmuc | NCTC13639_05593 | Not Available | Negative | 5184908 - 5185387 | 18033.4 |
| dna recombination protein | NCTC13639_05594 | Not Available | Negative | 5185398 - 5186339 | 36147.8 |
| uridine phosphorylase | NCTC13639_05595 | Not Available | Negative | 5186495 - 5187256 | 27103.6 |
| carboxymethylenebutenolidase | NCTC13639_05596 | Not Available | Positive | 5187522 - 5188328 | 29258.5 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | NCTC13639_05597 | Not Available | Negative | 5188383 - 5190644 | 84412.6 |
| lysr family transcriptional regulator | NCTC13639_05598 | Not Available | Positive | 5190880 - 5191833 | 35739.1 |
| carboxylate/amino acid/amine transporter | NCTC13639_05599 | Not Available | Negative | 5191721 - 5192425 | 26386.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

