Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manno(fructo)kinase | NCTC13639_05580 | Not Available | Negative | 5175234 - 5176148 | 32180.2 |
| fmn reductase | NCTC13639_05581 | Not Available | Negative | 5176376 - 5177077 | 26473.6 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | NCTC13639_05582 | Not Available | Negative | 5177118 - 5178233 | 41565.6 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | NCTC13639_05583 | Not Available | Negative | 5178196 - 5178612 | 15734.4 |
| transcriptional activator rfah | NCTC13639_05584 | Not Available | Positive | 5178817 - 5179305 | 18256.2 |
| dnase tatd | NCTC13639_05585 | Not Available | Negative | 5179311 - 5179544 | 9052.96 |
| dnase tatd | NCTC13639_05586 | Not Available | Negative | 5179558 - 5180094 | 20046.6 |
| sec-independent protein translocase protein | NCTC13639_05587 | Not Available | Negative | 5180136 - 5180927 | 29435.6 |
| sec-independent translocase | NCTC13639_05588 | Not Available | Negative | 5180930 - 5181478 | 19637.2 |
| twin arginine translocase protein a | NCTC13639_05589 | Not Available | Negative | 5181482 - 5181736 | 9026.87 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

