Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-guanine dinucleotide biosynthesis protein b | NCTC13639_05566 | Not Available | Positive | 5160312 - 5160815 | 18551.6 |
| Trna-ala | Not Available | Not Available | Positive | 5164276 - 5164351 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5164457 - 5164533 | Not Available |
| protoporphyrinogen oxidase | NCTC13639_05573 | Not Available | Negative | 5166523 - 5167068 | 20968.0 |
| potassium transporter | NCTC13639_05574 | Not Available | Negative | 5167080 - 5168531 | 52730.6 |
| impact family member yigz | NCTC13639_05575 | Not Available | Negative | 5168570 - 5169184 | 21695.0 |
| proline dipeptidase | NCTC13639_05576 | Not Available | Negative | 5169184 - 5170515 | 50241.9 |
| multifunctional fatty acid oxidation complex subunit alpha | NCTC13639_05577 | Not Available | Positive | 5170705 - 5172894 | 79623.5 |
| 3-ketoacyl-coa thiolase | NCTC13639_05578 | Not Available | Positive | 5172904 - 5174067 | 40999.8 |
| laci family transcriptional regulator | NCTC13639_05579 | Not Available | Negative | 5174246 - 5175226 | 36045.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

