Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily transporter | NCTC13639_05543 | Not Available | Positive | 5139633 - 5140781 | 42457.3 |
| inner membrane symporter yihp | NCTC13639_05544 | Not Available | Positive | 5141063 - 5141194 | 4973.24 |
| symporter | NCTC13639_05545 | Not Available | Positive | 5141202 - 5142242 | 38216.5 |
| inner membrane symporter yihp | NCTC13639_05546 | Not Available | Positive | 5142236 - 5142484 | 9242.41 |
| outer membrane porin l | NCTC13639_05547 | Not Available | Positive | 5142551 - 5143243 | 27087.6 |
| gtp-binding protein | NCTC13639_05548 | Not Available | Negative | 5143314 - 5144603 | 47589.0 |
| gtp-binding protein | NCTC13639_05549 | Not Available | Negative | 5144774 - 5145136 | 13407.2 |
| glutamine synthetase | NCTC13639_05550 | Not Available | Positive | 5145517 - 5146926 | 52009.9 |
| nitrogen regulation protein nr(ii) | NCTC13639_05551 | Not Available | Positive | 5147208 - 5148257 | 38364.3 |
| nitrogen regulation protein nr(i) | NCTC13639_05552 | Not Available | Positive | 5148268 - 5149677 | 52376.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

