Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase accessory protein fdhe | NCTC13639_05526 | Not Available | Positive | 5125862 - 5126791 | 34856.7 |
| pin domain | NCTC13639_05527 | Not Available | Negative | 5126828 - 5127202 | 13675.7 |
| ribbon-helix-helix protein, copg family | NCTC13639_05528 | Not Available | Negative | 5127202 - 5127450 | 9670.61 |
| lipase | NCTC13639_05529 | Not Available | Positive | 5127650 - 5128558 | 33451.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5128454 - 5128568 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 5128668 - 5131573 | Not Available |
| acetyltransferase | NCTC13639_05530 | Not Available | Negative | 5128709 - 5129650 | 35228.2 |
| d-tyrosyl-trna(tyr) deacylase | NCTC13639_05531 | Not Available | Negative | 5129695 - 5130132 | 16003.1 |
| ribonuclease bn | NCTC13639_05532 | Not Available | Negative | 5130129 - 5130908 | 28881.9 |
| phosphatase | NCTC13639_05533 | Not Available | Negative | 5130995 - 5131594 | 22785.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

