Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exoaminopeptidase | NCTC13639_05515 | Not Available | Positive | 5115972 - 5117042 | 38556.3 |
| putative frv operon regulatory protein | NCTC13639_05516 | Not Available | Positive | 5117042 - 5117494 | 17043.4 |
| putative frv operon regulatory protein | NCTC13639_05517 | Not Available | Positive | 5117448 - 5117885 | 16010.9 |
| putative frv operon regulatory protein | NCTC13639_05518 | Not Available | Positive | 5117887 - 5118786 | 33909.9 |
| protein of uncharacterised function (duf1471) | NCTC13639_05519 | Not Available | Negative | 5118843 - 5119055 | 7297.71 |
| uncharacterised protein | NCTC13639_05520 | Not Available | Positive | 5119185 - 5119706 | 20132.0 |
| inner membrane protein ygjv | NCTC13639_05521 | Not Available | Positive | 5119765 - 5120271 | 18661.4 |
| formate dehydrogenase accessory protein | NCTC13639_05522 | Not Available | Negative | 5120238 - 5121014 | 28192.1 |
| formate dehydrogenase-o, iron-sulfur subunit | NCTC13639_05524 | Not Available | Positive | 5124331 - 5125233 | 33022.0 |
| formate dehydrogenase-o subunit gamma | NCTC13639_05525 | Not Available | Positive | 5125230 - 5125865 | 24665.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

