Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | NCTC13639_05475 | Not Available | Positive | 5080210 - 5081139 | 33683.2 |
| ribonuclease activity regulator protein rraa | NCTC13639_05476 | Not Available | Positive | 5081232 - 5081717 | 17403.4 |
| 2-deoxy-d-gluconate 3-dehydrogenase | NCTC13639_05477 | Not Available | Positive | 5081905 - 5082648 | 25072.9 |
| cell division protein zapb | NCTC13639_05478 | Not Available | Negative | 5082851 - 5083090 | 9353.01 |
| glycerol uptake facilitator protein | NCTC13639_05479 | Not Available | Positive | 5083525 - 5084325 | 28269.9 |
| glycerol kinase | NCTC13639_05480 | Not Available | Positive | 5084393 - 5085901 | 56073.7 |
| fructose 1,6-bisphosphatase ii | NCTC13639_05481 | Not Available | Positive | 5086037 - 5086921 | 31074.6 |
| ferredoxin-nadp reductase | NCTC13639_05482 | Not Available | Positive | 5087144 - 5087890 | 27716.5 |
| predicted membrane protein | NCTC13639_05483 | Not Available | Negative | 5087954 - 5088382 | 16115.1 |
| protein of uncharacterised function (duf1454) | NCTC13639_05484 | Not Available | Positive | 5088483 - 5089079 | 21731.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

