Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine gamma-synthase | NCTC13639_05465 | Not Available | Negative | 5068995 - 5070155 | 41464.5 |
| transcriptional repressor protein metj | NCTC13639_05466 | Not Available | Positive | 5070420 - 5070737 | 12208.5 |
| major facilitator superfamily transporter | NCTC13639_05467 | Not Available | Negative | 5070790 - 5072214 | 52072.3 |
| oligogalacturonate-specific porin kdgm precursor | NCTC13639_05468 | Not Available | Negative | 5072293 - 5072973 | 26823.8 |
| 50s ribosomal protein l31 | NCTC13639_05469 | Not Available | Negative | 5073313 - 5073525 | 7869.45 |
| primosomal protein replication factor | NCTC13639_05470 | Not Available | Positive | 5073730 - 5075928 | 81715.4 |
| dna-binding transcriptional regulator cytr | NCTC13639_05471 | Not Available | Positive | 5076085 - 5077110 | 37449.5 |
| cell division protein ftsn | NCTC13639_05472 | Not Available | Positive | 5077309 - 5078178 | 32503.2 |
| atp-dependent protease peptidase subunit | NCTC13639_05473 | Not Available | Positive | 5078271 - 5078801 | 19028.9 |
| atp-dependent protease atp-binding subunit hslu | NCTC13639_05474 | Not Available | Positive | 5078811 - 5080142 | 49606.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

