Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | NCTC13639_05455 | Not Available | Positive | 5055890 - 5056738 | 32252.4 |
| fructose-6-phosphate aldolase | NCTC13639_05456 | Not Available | Positive | 5056986 - 5057648 | 23515.6 |
| glycerol dehydrogenase | NCTC13639_05457 | Not Available | Positive | 5057661 - 5058764 | 38712.4 |
| catalase-peroxidase (hydroperoxidase i) | NCTC13639_05458 | Not Available | Negative | 5058851 - 5061031 | 79693.4 |
| 5,10-methylenetetrahydrofolate reductase | NCTC13639_05459 | Not Available | Negative | 5061200 - 5062087 | 33024.4 |
| dna-binding transcriptional activator xapr | NCTC13639_05460 | Not Available | Negative | 5062245 - 5063078 | 30934.8 |
| 4-carboxymuconolactone decarboxylase | NCTC13639_05461 | Not Available | Positive | 5063138 - 5063620 | 17429.2 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase periplasmic precursor | NCTC13639_05462 | Not Available | Negative | 5063659 - 5065215 | 56351.3 |
| uncharacterised protein | NCTC13639_05463 | Not Available | Positive | 5065349 - 5066524 | 44849.5 |
| bifunctional aspartate kinase ii/homoserine dehydrogenase ii | NCTC13639_05464 | Not Available | Negative | 5066560 - 5068992 | 88770.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

