Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin--protein ligase | NCTC13639_05429 | Not Available | Negative | 5030386 - 5031348 | 35225.8 |
| udp-n-acetylenolpyruvoylglucosamine reductase | NCTC13639_05430 | Not Available | Negative | 5031345 - 5032373 | 37867.3 |
| Trna-ala | Not Available | Not Available | Positive | 5036097 - 5036172 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5036278 - 5036354 | Not Available |
| glutamate racemase | NCTC13639_05437 | Not Available | Negative | 5038346 - 5039197 | 31059.6 |
| vitamin b12 tonb-dependent receptor | NCTC13639_05438 | Not Available | Negative | 5039142 - 5040797 | 61389.4 |
| vitamin b12/cobalamin outer membrane transporter | NCTC13639_05439 | Not Available | Negative | 5040807 - 5040980 | 6374.72 |
| trna (uracil-5-)-methyltransferase | NCTC13639_05441 | Not Available | Positive | 5041284 - 5041931 | 25107.3 |
| trna (uracil-5-)-methyltransferase | NCTC13639_05442 | Not Available | Positive | 5041928 - 5042446 | 19406.3 |
| inner membrane protein yijd | NCTC13639_05443 | Not Available | Negative | 5042529 - 5042888 | 13038.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

