Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf416) | NCTC13639_05397 | Not Available | Negative | 5003249 - 5003839 | 22675.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 5003939 - 5005469 | Not Available |
| endonuclease v | NCTC13639_05398 | Not Available | Negative | 5003873 - 5004553 | 24845.3 |
| uroporphyrinogen decarboxylase | NCTC13639_05399 | Not Available | Negative | 5004563 - 5005627 | 39292.6 |
| nadh pyrophosphatase | NCTC13639_05400 | Not Available | Negative | 5005678 - 5006451 | 29651.6 |
| regulator of sigma d | NCTC13639_05401 | Not Available | Positive | 5006548 - 5007036 | 18641.5 |
| thiamine biosynthesis protein thic | NCTC13639_05403 | Not Available | Positive | 5007292 - 5009190 | 70820.1 |
| thiamine-phosphate pyrophosphorylase | NCTC13639_05404 | Not Available | Positive | 5009190 - 5009825 | 22945.5 |
| adenylyltransferase | NCTC13639_05405 | Not Available | Positive | 5009818 - 5010576 | 27233.9 |
| sulfur carrier protein this | NCTC13639_05406 | Not Available | Positive | 5010545 - 5010757 | 7752.31 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

