Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage-related protein | NCTC13639_05375 | Not Available | Negative | 4975452 - 4975811 | 13438.2 |
| peptidase e | NCTC13639_05376 | Not Available | Positive | 4976025 - 4976714 | 24580.8 |
| transporter | NCTC13639_05377 | Not Available | Negative | 4976780 - 4977151 | 14142.7 |
| transporter | NCTC13639_05378 | Not Available | Negative | 4977156 - 4978412 | 45440.1 |
| b12-dependent methionine synthase | NCTC13639_05379 | Not Available | Negative | 4978651 - 4982334 | 135926.0 |
| transcriptional repressor iclr | NCTC13639_05380 | Not Available | Positive | 4982530 - 4983354 | 29619.7 |
| isocitrate dehydrogenase kinase/phosphatase | NCTC13639_05381 | Not Available | Negative | 4983376 - 4985124 | 67973.7 |
| isocitrate lyase | NCTC13639_05382 | Not Available | Negative | 4985227 - 4986531 | 47685.2 |
| malate synthase | NCTC13639_05383 | Not Available | Negative | 4986563 - 4988164 | 60432.3 |
| homoserine o-succinyltransferase | NCTC13639_05384 | Not Available | Negative | 4988433 - 4989362 | 35726.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

