Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 4961095 - 4962625 | Not Available |
| predicted nucleotidyltransferase | NCTC13639_05356 | Not Available | Negative | 4960725 - 4961510 | 30271.3 |
| hflc protein | NCTC13639_05357 | Not Available | Negative | 4961516 - 4962643 | 42047.1 |
| transcriptional regulator | NCTC13639_05358 | Not Available | Positive | 4963093 - 4964679 | 59837.5 |
| uncharacterized conserved small protein | NCTC13639_05359 | Not Available | Negative | 4964700 - 4965038 | 12546.3 |
| yjbd family (duf3811) | NCTC13639_05360 | Not Available | Positive | 4965579 - 4965851 | 10486.7 |
| 23s rrna pseudouridine synthase f | NCTC13639_05361 | Not Available | Negative | 4965848 - 4966363 | 19205.6 |
| 23s rrna pseudouridine synthase f | NCTC13639_05362 | Not Available | Negative | 4966356 - 4966730 | 13911.7 |
| sorbitol operon regulator | NCTC13639_05363 | Not Available | Positive | 4967200 - 4968153 | 35230.1 |
| 3-ketoacyl-(acyl-carrier-protein) reductase | NCTC13639_05364 | Not Available | Positive | 4968224 - 4969030 | 28982.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

