Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate permease | NCTC13639_05232 | Not Available | Positive | 4867011 - 4868660 | 59205.6 |
| inner membrane protein yohk | NCTC13639_05233 | Not Available | Negative | 4868706 - 4869395 | 24807.3 |
| holin-like protein cida | NCTC13639_05234 | Not Available | Negative | 4869388 - 4869798 | 15312.7 |
| lysr family transcriptional regulator | NCTC13639_05235 | Not Available | Positive | 4869900 - 4870703 | 29962.4 |
| sodium/hydrogen exchanger | NCTC13639_05236 | Not Available | Negative | 4870841 - 4871356 | 19397.4 |
| sodium/hydrogen exchanger | NCTC13639_05237 | Not Available | Negative | 4871322 - 4872485 | 42308.4 |
| permease | NCTC13639_05238 | Not Available | Negative | 4872643 - 4873992 | 45727.5 |
| redox-sensitive transcriptional activator | NCTC13639_05240 | Not Available | Negative | 4874592 - 4875050 | 16853.4 |
| dna-binding transcriptional regulator soxs | NCTC13639_05241 | Not Available | Positive | 4875137 - 4875460 | 12961.6 |
| signal transduction protein | NCTC13639_05242 | Not Available | Negative | 4875463 - 4877049 | 60399.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

