Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent nitrite reductase complex subunit nrfg | NCTC13639_05222 | Not Available | Negative | 4857554 - 4858165 | 22921.9 |
| formate-dependent nitrite reductase complex subunit nrff | NCTC13639_05223 | Not Available | Negative | 4858165 - 4858671 | 18745.8 |
| heme lyase subunit nrfe | NCTC13639_05224 | Not Available | Negative | 4858664 - 4860331 | 62391.6 |
| cytochrome c-type biogenesis protein | NCTC13639_05225 | Not Available | Negative | 4860400 - 4861356 | 35189.5 |
| cytochrome c-type biogenesis protein | NCTC13639_05226 | Not Available | Negative | 4861353 - 4862024 | 24431.4 |
| cytochrome c nitrite reductase pentaheme subunit | NCTC13639_05227 | Not Available | Negative | 4862021 - 4862587 | 20889.8 |
| cytochrome c552 | NCTC13639_05228 | Not Available | Negative | 4862632 - 4864068 | 53684.7 |
| acetyl-coa synthetase | NCTC13639_05229 | Not Available | Positive | 4864503 - 4864892 | 14796.3 |
| acetyl-coa synthetase | NCTC13639_05230 | Not Available | Positive | 4864840 - 4866462 | 59306.5 |
| inner membrane protein yjch | NCTC13639_05231 | Not Available | Positive | 4866700 - 4867014 | 11689.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

