Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoimidazole riboside kinase | NCTC13639_05211 | Not Available | Positive | 4843518 - 4844519 | 36594.9 |
| osmolarity response regulator | NCTC13639_05212 | Not Available | Negative | 4844607 - 4845338 | 26781.0 |
| metallo-beta-lactamase superfamily | NCTC13639_05213 | Not Available | Positive | 4845631 - 4847616 | 73634.4 |
| uncharacterised protein | NCTC13639_05214 | Not Available | Positive | 4847824 - 4848099 | 10296.1 |
| hemolysin d | NCTC13639_05215 | Not Available | Positive | 4848119 - 4849153 | 37162.8 |
| multidrug efflux system protein mdto | NCTC13639_05216 | Not Available | Positive | 4849150 - 4851189 | 75935.3 |
| multidrug resistance outer membrane protein mdtq | NCTC13639_05217 | Not Available | Positive | 4851189 - 4852646 | 53075.0 |
| formate dehydrogenase h alph subunit (formate-hydrogen-lyase-linked selenocysteine-containing polypeptide) | NCTC13639_05219 | Not Available | Positive | 4853319 - 4854998 | 62332.7 |
| sel1 repeat | NCTC13639_05220 | Not Available | Positive | 4855102 - 4855791 | 25115.5 |
| glutamate/aspartate:proton symporter | NCTC13639_05221 | Not Available | Negative | 4855896 - 4857209 | 47153.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

