Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-phosphorus lyase complex accessory protein | NCTC13639_05201 | Not Available | Positive | 4834151 - 4834909 | 28037.8 |
| plasmid stability protein stbd (putative antitoxin) | NCTC13639_05202 | Not Available | Positive | 4834988 - 4835239 | 9202.01 |
| plasmid stability protein stbe (putative toxin) | NCTC13639_05203 | Not Available | Positive | 4835236 - 4835523 | 11043.5 |
| uncharacterised protein | NCTC13639_05204 | Not Available | Negative | 4835520 - 4835849 | 13451.3 |
| sensory histidine kinase atos | NCTC13639_05205 | Not Available | Negative | 4835919 - 4838183 | 82902.9 |
| abc transporter atp-binding protein | NCTC13639_05206 | Not Available | Positive | 4838298 - 4839821 | 55683.0 |
| ribose abc transporter permease protein | NCTC13639_05207 | Not Available | Positive | 4839814 - 4840809 | 34640.6 |
| d-ribose transporter subunit rbsb | NCTC13639_05208 | Not Available | Positive | 4840898 - 4841839 | 32787.6 |
| abc-type sugar transport system, auxiliary component | NCTC13639_05209 | Not Available | Positive | 4841960 - 4842643 | 25816.3 |
| sugar-bisphosphate aldolase | NCTC13639_05210 | Not Available | Positive | 4842658 - 4843518 | 31293.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

