Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate transporter | NCTC13639_05170 | Not Available | Negative | 4802991 - 4803821 | 30339.6 |
| carbohydrate transporter | NCTC13639_05171 | Not Available | Negative | 4803814 - 4804422 | 22785.2 |
| 6-phospho-beta-glucosidase | NCTC13639_05172 | Not Available | Negative | 4804515 - 4805867 | 50467.6 |
| l-rhamnose operon transcriptional activator | NCTC13639_05173 | Not Available | Positive | 4806140 - 4807072 | 35633.7 |
| lysine decarboxylase, constitutive | NCTC13639_05174 | Not Available | Positive | 4807310 - 4809577 | 83949.1 |
| transcriptional regulator of virulence rega | NCTC13639_05175 | Not Available | Positive | 4809889 - 4810650 | 28840.1 |
| putrescine transporter | NCTC13639_05176 | Not Available | Positive | 4810778 - 4812115 | 47032.6 |
| putative cell division protein | NCTC13639_05177 | Not Available | Positive | 4812263 - 4813579 | 49047.3 |
| two-component response regulator | NCTC13639_05178 | Not Available | Positive | 4813905 - 4814075 | 5905.17 |
| two-component response regulator | NCTC13639_05179 | Not Available | Positive | 4814122 - 4814574 | 17151.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

