Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 4785759 - 4785834 | Not Available |
| long-chain-fatty-acid--coa ligase | NCTC13639_05157 | Not Available | Positive | 4786568 - 4787938 | 50412.5 |
| sulfate transporter | NCTC13639_05158 | Not Available | Negative | 4788158 - 4789879 | 61844.0 |
| Trna-glu | Not Available | Not Available | Positive | 4793497 - 4793572 | Not Available |
| sensory histidine kinase dcus | NCTC13639_05164 | Not Available | Positive | 4795796 - 4797427 | 60437.2 |
| dna-binding transcriptional activator dcur | NCTC13639_05165 | Not Available | Positive | 4797424 - 4798143 | 27553.9 |
| anaerobic c4-dicarboxylate transporter | NCTC13639_05166 | Not Available | Positive | 4798859 - 4800199 | 47982.3 |
| fumarate hydratase class i, anaerobic | NCTC13639_05167 | Not Available | Positive | 4800296 - 4801942 | 59879.4 |
| inner membrane protein yjdf | NCTC13639_05168 | Not Available | Positive | 4802060 - 4802713 | 24099.2 |
| pq loop repeat | NCTC13639_05169 | Not Available | Negative | 4802734 - 4802988 | 9471.96 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

