Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | NCTC13639_05099 | Not Available | Negative | 4734316 - 4734525 | 7651.43 |
| putative biofilm stress and motility protein a | NCTC13639_05100 | Not Available | Positive | 4735185 - 4735460 | 9787.56 |
| isovaleryl coa dehydrogenase | NCTC13639_05101 | Not Available | Negative | 4735546 - 4736280 | 27712.2 |
| isovaleryl coa dehydrogenase | NCTC13639_05102 | Not Available | Negative | 4736267 - 4737169 | 33263.8 |
| 23s rrna (guanosine-2'-o-)-methyltransferase | NCTC13639_05103 | Not Available | Negative | 4737299 - 4738030 | 26574.3 |
| exoribonuclease r | NCTC13639_05104 | Not Available | Negative | 4738156 - 4738548 | 14606.2 |
| exoribonuclease r | NCTC13639_05105 | Not Available | Negative | 4738529 - 4740565 | 77144.5 |
| transcriptional repressor | NCTC13639_05106 | Not Available | Negative | 4740722 - 4741147 | 15592.0 |
| adenylosuccinate synthetase | NCTC13639_05107 | Not Available | Negative | 4741364 - 4742662 | 47341.9 |
| uncharacterized protein conserved in bacteria (duf2065) | NCTC13639_05108 | Not Available | Negative | 4742765 - 4742962 | 7050.15 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

