Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | NCTC13639_05089 | Not Available | Negative | 4727073 - 4727759 | 25349.2 |
| l-xylulose 5-phosphate 3-epimerase | NCTC13639_05090 | Not Available | Negative | 4727759 - 4728613 | 32049.4 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | NCTC13639_05091 | Not Available | Negative | 4728623 - 4729273 | 23595.4 |
| ascorbate-specific pts system eiia component | NCTC13639_05092 | Not Available | Negative | 4729286 - 4729753 | 16980.3 |
| ascorbate-specific pts system eiib component | NCTC13639_05093 | Not Available | Negative | 4729764 - 4729949 | 6543.94 |
| ascorbate-specific pts system eiib component | NCTC13639_05094 | Not Available | Negative | 4729972 - 4730070 | 3547.57 |
| pts system ascorbate-specific transporter subunit iic | NCTC13639_05095 | Not Available | Negative | 4730086 - 4731483 | 50797.6 |
| putative l-ascorbate 6-phosphate lactonase | NCTC13639_05096 | Not Available | Positive | 4731851 - 4732915 | 40065.7 |
| transcriptional repressor ular | NCTC13639_05097 | Not Available | Positive | 4733023 - 4733778 | 27566.5 |
| esterase | NCTC13639_05098 | Not Available | Negative | 4733775 - 4734296 | 19419.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

