Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine/d-serine/glycine permease | NCTC13639_05079 | Not Available | Negative | 4719699 - 4721108 | 51606.6 |
| peptidyl-prolyl cis-trans isomerase | NCTC13639_05080 | Not Available | Negative | 4721418 - 4722086 | 23986.7 |
| opacity-associated protein a lysm-like domain | NCTC13639_05081 | Not Available | Positive | 4722258 - 4722908 | 23626.0 |
| o-acetylserine/cysteine export protein | NCTC13639_05082 | Not Available | Negative | 4722938 - 4723861 | 33141.1 |
| 50s ribosomal protein l9 | NCTC13639_05083 | Not Available | Negative | 4724004 - 4724453 | 15774.9 |
| 30s ribosomal protein s18 | NCTC13639_05084 | Not Available | Negative | 4724495 - 4724722 | 8986.94 |
| primosomal replication protein n | NCTC13639_05085 | Not Available | Negative | 4724727 - 4725041 | 11329.7 |
| 30s ribosomal protein s6 | NCTC13639_05086 | Not Available | Negative | 4725048 - 4725443 | 15160.8 |
| sulfite exporter taue/safe | NCTC13639_05087 | Not Available | Negative | 4725602 - 4726366 | 27430.5 |
| protein of uncharacterised function (duf1471) | NCTC13639_05088 | Not Available | Positive | 4726665 - 4726940 | 9972.71 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

