Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf1107) | NCTC13639_05069 | Not Available | Negative | 4709771 - 4709977 | 8088.21 |
| predicted transcriptional regulator | NCTC13639_05070 | Not Available | Positive | 4710306 - 4710863 | 20580.8 |
| adenosine-3'(2'),5'-bisphosphate nucleotidase | NCTC13639_05071 | Not Available | Negative | 4710853 - 4711593 | 27231.6 |
| bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein | NCTC13639_05072 | Not Available | Positive | 4711782 - 4713725 | 70713.9 |
| hth-type transcriptional activator hxlr | NCTC13639_05073 | Not Available | Negative | 4713823 - 4714209 | 14373.3 |
| quinone oxidoreductase 2 | NCTC13639_05074 | Not Available | Positive | 4714294 - 4715142 | 29109.5 |
| arac family transcriptional regulator | NCTC13639_05075 | Not Available | Positive | 4715224 - 4716048 | 31747.8 |
| inner membrane protein ytff | NCTC13639_05076 | Not Available | Positive | 4716125 - 4717090 | 35006.3 |
| methyl-accepting chemotaxis protein | NCTC13639_05077 | Not Available | Negative | 4717154 - 4718707 | 55388.8 |
| iron-sulfur cluster repair di-iron protein | NCTC13639_05078 | Not Available | Positive | 4718953 - 4719615 | 24930.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

