Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate trap transporter substrate-binding periplasmic protein | NCTC13639_05017 | Not Available | Negative | 4661266 - 4662243 | 36296.0 |
| atpase p | NCTC13639_05018 | Not Available | Negative | 4662622 - 4665330 | 99877.9 |
| trehalose repressor | NCTC13639_05020 | Not Available | Positive | 4665720 - 4666667 | 34908.1 |
| pts system trehalose(maltose)-specific transporter subunits iibc | NCTC13639_05021 | Not Available | Positive | 4666824 - 4667135 | 11260.5 |
| pts system trehalose(maltose)-specific transporter subunits iibc | NCTC13639_05022 | Not Available | Positive | 4667122 - 4668243 | 40253.9 |
| trehalose-6-phosphate hydrolase | NCTC13639_05023 | Not Available | Positive | 4668293 - 4669945 | 63515.1 |
| porin nanc | NCTC13639_05024 | Not Available | Positive | 4670107 - 4670850 | 28351.3 |
| hex-regulon repressor (rpir-family transcriptional regulator) | NCTC13639_05025 | Not Available | Negative | 4670855 - 4671514 | 24662.9 |
| pts system fructose-specific transporter subunits iibc | NCTC13639_05026 | Not Available | Positive | 4671695 - 4672198 | 18262.0 |
| fructose-like specific pts system eiic component 1 | NCTC13639_05027 | Not Available | Positive | 4672137 - 4672823 | 24585.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

