Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan permease | NCTC13639_04966 | Not Available | Negative | 4616480 - 4617652 | 42695.9 |
| tyrosine phenol-lyase | NCTC13639_04967 | Not Available | Negative | 4617841 - 4619211 | 51502.9 |
| predicted restriction endonuclease | NCTC13639_04969 | Not Available | Negative | 4620405 - 4621040 | 23882.7 |
| uncharacterised protein | NCTC13639_04970 | Not Available | Positive | 4621172 - 4622053 | 33221.6 |
| site-specific tyrosine recombinase xerd | NCTC13639_04971 | Not Available | Positive | 4622214 - 4623464 | 47980.2 |
| uncharacterised protein | NCTC13639_04972 | Not Available | Negative | 4623511 - 4623981 | 18286.0 |
| uncharacterised protein | NCTC13639_04973 | Not Available | Negative | 4624105 - 4624317 | 7896.84 |
| uncharacterised protein | NCTC13639_04974 | Not Available | Negative | 4624382 - 4625398 | 37608.5 |
| uncharacterised protein | NCTC13639_04975 | Not Available | Negative | 4625417 - 4625761 | 11887.0 |
| uncharacterised protein | NCTC13639_04976 | Not Available | Negative | 4626504 - 4626848 | 12030.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

