Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein | NCTC13639_04946 | Not Available | Positive | 4594708 - 4595238 | 19194.0 |
| cystathionine beta-lyase | NCTC13639_04947 | Not Available | Negative | 4595319 - 4595537 | 7884.33 |
| cystathionine beta-lyase | NCTC13639_04948 | Not Available | Negative | 4595518 - 4596510 | 36371.5 |
| transport protein | NCTC13639_04949 | Not Available | Negative | 4596541 - 4597695 | 40363.0 |
| lysr family transcriptional regulator | NCTC13639_04950 | Not Available | Positive | 4597994 - 4598920 | 34514.5 |
| predicted membrane protein | NCTC13639_04951 | Not Available | Positive | 4598996 - 4600276 | 47982.2 |
| predicted acetyltransferase | NCTC13639_04952 | Not Available | Positive | 4600290 - 4600754 | 17807.3 |
| major facilitator superfamily protein | NCTC13639_04953 | Not Available | Positive | 4600852 - 4602039 | 41790.7 |
| uncharacterised protein | NCTC13639_04954 | Not Available | Positive | 4602230 - 4602631 | 14910.0 |
| outer membrane porin protein | NCTC13639_04955 | Not Available | Negative | 4602694 - 4603701 | 36418.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

