Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative gtp-binding protein yjia | NCTC13639_04936 | Not Available | Positive | 4585423 - 4586379 | 35637.7 |
| protein of uncharacterised function (duf2955) | NCTC13639_04937 | Not Available | Negative | 4586430 - 4587494 | 39376.4 |
| hemolysin d | NCTC13639_04938 | Not Available | Negative | 4587484 - 4588551 | 39673.1 |
| transcriptional regulator slya | NCTC13639_04939 | Not Available | Negative | 4588558 - 4589022 | 17720.4 |
| uncharacterized conserved small protein | NCTC13639_04940 | Not Available | Negative | 4589168 - 4589332 | 6688.15 |
| gntr family transcriptional regulator | NCTC13639_04941 | Not Available | Positive | 4589510 - 4590922 | 52634.2 |
| transposase | NCTC13639_04942 | Not Available | Negative | 4590974 - 4591924 | 35945.2 |
| arac family transcriptional regulator | NCTC13639_04943 | Not Available | Positive | 4592155 - 4592970 | 31233.1 |
| lyse-family transporter | NCTC13639_04944 | Not Available | Positive | 4593019 - 4593669 | 23504.1 |
| multidrug resistance protein | NCTC13639_04945 | Not Available | Positive | 4593996 - 4594736 | 26502.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

