Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal-protein-alanine n-acetyltransferase | NCTC13639_04906 | Not Available | Negative | 4559717 - 4560163 | 16709.9 |
| dna polymerase iii subunit psi | NCTC13639_04907 | Not Available | Negative | 4560132 - 4560545 | 15384.5 |
| 16s ribosomal rna m2g1207 methyltransferase | NCTC13639_04908 | Not Available | Positive | 4560649 - 4561680 | 37730.9 |
| Trna-leu | Not Available | Not Available | Positive | 4561903 - 4561989 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4562018 - 4562103 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4562136 - 4562222 | Not Available |
| diguanylate cyclase adra | NCTC13639_04912 | Not Available | Positive | 4562756 - 4563832 | 40372.8 |
| ferric iron reductase involved in ferric hydroximate transport | NCTC13639_04913 | Not Available | Positive | 4563941 - 4564729 | 29968.4 |
| pts system protein, component eiic | NCTC13639_04914 | Not Available | Negative | 4564759 - 4566102 | 49258.8 |
| uncharacterised protein | NCTC13639_04915 | Not Available | Negative | 4566092 - 4566232 | 4829.83 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

