Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein | NCTC13639_04886 | Not Available | Positive | 4539748 - 4541415 | 62325.3 |
| transcriptional regulator | NCTC13639_04887 | Not Available | Negative | 4541515 - 4542744 | 47186.2 |
| dna repair protein | NCTC13639_04888 | Not Available | Negative | 4542833 - 4544215 | 49460.1 |
| phosphoserine phosphatase | NCTC13639_04889 | Not Available | Negative | 4544227 - 4545195 | 35020.8 |
| uncharacterised domain/lipoate-protein ligase a fusion protein | NCTC13639_04890 | Not Available | Positive | 4545311 - 4545952 | 23924.1 |
| lipoate-protein ligase a | NCTC13639_04891 | Not Available | Positive | 4545990 - 4547006 | 37939.8 |
| purine nucleoside phosphorylase | NCTC13639_04892 | Not Available | Negative | 4547157 - 4547876 | 25980.5 |
| phosphopentomutase | NCTC13639_04893 | Not Available | Negative | 4547980 - 4548753 | 28382.7 |
| phosphopentomutase | NCTC13639_04894 | Not Available | Negative | 4548731 - 4549204 | 16788.8 |
| thymidine phosphorylase | NCTC13639_04895 | Not Available | Negative | 4549256 - 4550422 | 41020.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

