Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component response regulator | NCTC13639_04876 | Not Available | Positive | 4529900 - 4530616 | 27292.7 |
| inner membrane protein | NCTC13639_04877 | Not Available | Negative | 4530677 - 4532038 | 50077.9 |
| two-component system sensor kinase | NCTC13639_04878 | Not Available | Negative | 4532096 - 4533520 | 51991.6 |
| two-component response regulator | NCTC13639_04879 | Not Available | Negative | 4533520 - 4534209 | 26240.9 |
| uncharacterized protein conserved in bacteria | NCTC13639_04880 | Not Available | Negative | 4534222 - 4534695 | 17067.7 |
| right origin-binding protein | NCTC13639_04881 | Not Available | Positive | 4534907 - 4535776 | 33125.8 |
| phosphoglycerate mutase | NCTC13639_04882 | Not Available | Negative | 4535773 - 4536420 | 23907.5 |
| ntpase | NCTC13639_04883 | Not Available | Positive | 4536492 - 4537007 | 18661.1 |
| trp operon repressor | NCTC13639_04884 | Not Available | Negative | 4537063 - 4537359 | 11342.8 |
| lytic murein transglycosylase | NCTC13639_04885 | Not Available | Negative | 4537479 - 4539416 | 73463.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

