Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transport protein | NCTC13639_04854 | Not Available | Positive | 4506565 - 4507938 | 50101.1 |
| glycosyl hydrolase | NCTC13639_04855 | Not Available | Positive | 4507979 - 4510018 | 78578.0 |
| transcriptional activator nhar | NCTC13639_04856 | Not Available | Negative | 4510068 - 4510907 | 31534.1 |
| ph-dependent sodium/proton antiporter | NCTC13639_04857 | Not Available | Negative | 4511007 - 4512173 | 41316.4 |
| chaperone protein dnaj | NCTC13639_04858 | Not Available | Negative | 4512381 - 4513514 | 41044.7 |
| molecular chaperone dnak | NCTC13639_04860 | Not Available | Negative | 4513600 - 4515522 | 69305.0 |
| protein of uncharacterised function (duf2541) | NCTC13639_04861 | Not Available | Positive | 4515906 - 4516310 | 14495.5 |
| uncharacterized protein conserved in bacteria | NCTC13639_04862 | Not Available | Positive | 4516344 - 4517057 | 26380.0 |
| inner membrane protein yaah | NCTC13639_04863 | Not Available | Positive | 4517206 - 4517772 | 19998.1 |
| transport protein | NCTC13639_04864 | Not Available | Negative | 4517809 - 4519116 | 47366.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

