Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional activator caif | NCTC13639_04834 | Not Available | Negative | 4485260 - 4485667 | 15761.6 |
| carbamoyl phosphate synthase large subunit | NCTC13639_04835 | Not Available | Negative | 4485931 - 4489158 | 118109.0 |
| carbamoyl phosphate synthase small subunit | NCTC13639_04836 | Not Available | Negative | 4489176 - 4490324 | 41267.0 |
| dihydrodipicolinate reductase | NCTC13639_04837 | Not Available | Negative | 4490780 - 4491601 | 28866.6 |
| laci family transcriptional regulator | NCTC13639_04838 | Not Available | Negative | 4491735 - 4492742 | 36525.0 |
| probable mannose-6-phosphate isomerase gmuf | NCTC13639_04839 | Not Available | Positive | 4492932 - 4494677 | 65700.8 |
| pts system protein | NCTC13639_04840 | Not Available | Positive | 4494682 - 4495110 | 14928.2 |
| pts system protein | NCTC13639_04841 | Not Available | Positive | 4495122 - 4495616 | 18005.7 |
| pts system protein | NCTC13639_04842 | Not Available | Positive | 4495627 - 4496424 | 28434.7 |
| pts system protein | NCTC13639_04843 | Not Available | Positive | 4496424 - 4497242 | 29483.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

