Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase fixc | NCTC13639_04824 | Not Available | Negative | 4474562 - 4475848 | 45747.8 |
| electron transfer flavoprotein subunit of oxidoreductase | NCTC13639_04825 | Not Available | Negative | 4475897 - 4476838 | 33335.9 |
| putative electron transfer flavoprotein fixa | NCTC13639_04826 | Not Available | Negative | 4476854 - 4477624 | 27304.7 |
| l-carnitine/gamma-butyrobetaine antiporter | NCTC13639_04827 | Not Available | Positive | 4478491 - 4479378 | 33250.5 |
| l-carnitine/gamma-butyrobetaine antiporter | NCTC13639_04828 | Not Available | Positive | 4479401 - 4479625 | 8032.2 |
| crotonobetainyl-coa dehydrogenase | NCTC13639_04829 | Not Available | Positive | 4479660 - 4480802 | 42485.7 |
| crotonobetainyl-coa:carnitine coa-transferase | NCTC13639_04830 | Not Available | Positive | 4480908 - 4482125 | 44954.1 |
| putative crotonobetaine/carnitine-coa ligase | NCTC13639_04831 | Not Available | Positive | 4482188 - 4483741 | 58309.9 |
| carnitinyl-coa dehydratase | NCTC13639_04832 | Not Available | Positive | 4483796 - 4484581 | 28138.7 |
| carnitine operon protein caie | NCTC13639_04833 | Not Available | Positive | 4484588 - 4485184 | 21482.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

