Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | NCTC13639_04814 | Not Available | Positive | 4466153 - 4467145 | 34983.6 |
| dimethyladenosine transferase | NCTC13639_04815 | Not Available | Positive | 4467138 - 4467959 | 30436.0 |
| apag protein | NCTC13639_04816 | Not Available | Positive | 4467962 - 4468339 | 13975.7 |
| diadenosine tetraphosphatase | NCTC13639_04817 | Not Available | Positive | 4468350 - 4469198 | 31490.4 |
| dihydrofolate reductase | NCTC13639_04818 | Not Available | Negative | 4469295 - 4469774 | 18029.3 |
| glutathione-regulated potassium-efflux system protein | NCTC13639_04819 | Not Available | Negative | 4469973 - 4471835 | 67418.5 |
| glutathione-regulated potassium-efflux system ancillary protein keff | NCTC13639_04820 | Not Available | Negative | 4471828 - 4472358 | 20183.2 |
| lipoprotein | NCTC13639_04821 | Not Available | Negative | 4472462 - 4472695 | 8304.73 |
| major facilitator superfamily protein | NCTC13639_04822 | Not Available | Negative | 4472787 - 4474130 | 48917.3 |
| ferredoxin like protein | NCTC13639_04823 | Not Available | Negative | 4474278 - 4474565 | 10571.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

