Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | NCTC13639_04804 | Not Available | Positive | 4452542 - 4453414 | 32096.5 |
| l-ribulose-5-phosphate 4-epimerase | NCTC13639_04805 | Not Available | Positive | 4453512 - 4454207 | 25635.4 |
| uncharacterised protein | NCTC13639_04806 | Not Available | Negative | 4454248 - 4454631 | 14942.3 |
| dna polymerase ii | NCTC13639_04807 | Not Available | Positive | 4455228 - 4456664 | 54781.4 |
| dna polymerase ii | NCTC13639_04808 | Not Available | Positive | 4456651 - 4457580 | 35827.9 |
| atp-dependent helicase hepa | NCTC13639_04809 | Not Available | Positive | 4457712 - 4460618 | 109655.0 |
| 23s rrna/trna pseudouridine synthase a | NCTC13639_04810 | Not Available | Positive | 4460630 - 4461289 | 24855.1 |
| dna-j like membrane chaperone protein | NCTC13639_04811 | Not Available | Negative | 4461385 - 4462200 | 30778.5 |
| organic solvent tolerance protein precursor | NCTC13639_04812 | Not Available | Positive | 4462456 - 4464813 | 89775.9 |
| peptidyl-prolyl cis-trans isomerase sura | NCTC13639_04813 | Not Available | Positive | 4464867 - 4466153 | 46970.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

