Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 3 catalytic subunit | NCTC13639_04781 | Not Available | Negative | 4429402 - 4430991 | 58287.3 |
| acetolactate synthase 3 catalytic subunit | NCTC13639_04782 | Not Available | Negative | 4431023 - 4431127 | 3742.65 |
| lysr family transcriptional regulator | NCTC13639_04783 | Not Available | Negative | 4431446 - 4432393 | 35764.0 |
| 2-isopropylmalate synthase | NCTC13639_04785 | Not Available | Positive | 4433225 - 4434796 | 57454.3 |
| 3-isopropylmalate dehydrogenase | NCTC13639_04786 | Not Available | Positive | 4434796 - 4435887 | 39440.2 |
| isopropylmalate isomerase large subunit | NCTC13639_04787 | Not Available | Positive | 4435890 - 4437290 | 49749.5 |
| isopropylmalate isomerase small subunit | NCTC13639_04788 | Not Available | Positive | 4437301 - 4437906 | 22558.7 |
| gluconate utilization operon repressor | NCTC13639_04789 | Not Available | Negative | 4437952 - 4438965 | 37498.2 |
| major facilitator superfamily transporter | NCTC13639_04790 | Not Available | Negative | 4439027 - 4440310 | 47619.3 |
| gluconate 5-dehydrogenase | NCTC13639_04791 | Not Available | Negative | 4440369 - 4441133 | 27412.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

