Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative host specificity protein | NCTC13639_05269 | Not Available | Negative | 4897266 - 4898072 | 28550.7 |
| Central tail fiber | NCTC13639_05270 | Not Available | Negative | 4898245 - 4898970 | 25842.1 |
| Host specificity protein (tail fiber protein) | NCTC13639_05271 | Not Available | Negative | 4899315 - 4899983 | 25133.4 |
| Host specificity protein (tail fiber protein) | NCTC13639_05272 | Not Available | Negative | 4900254 - 4900367 | 4151.18 |
| Tail assembly protein | NCTC13639_05273 | Not Available | Negative | 4900638 - 4900769 | 4552.65 |
| Tail assembly protein | NCTC13639_05274 | Not Available | Negative | 4900766 - 4901041 | 10002.2 |
| uncharacterised protein | NCTC13639_05275 | Not Available | Negative | 4901035 - 4901124 | 3168.11 |
| Tail fiber cell wall hydrolase | NCTC13639_05276 | Not Available | Negative | 4901102 - 4901491 | 15231.9 |
| Tail assembly protein | NCTC13639_05277 | Not Available | Negative | 4901561 - 4901839 | 10209.3 |
| Minor tail protein | NCTC13639_05278 | Not Available | Negative | 4902003 - 4902272 | 10134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

