Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide pyrophosphorylase | NCTC13639_04750 | Not Available | Positive | 4398122 - 4399015 | 32911.1 |
| prepilin peptidase dependent protein d precursor | NCTC13639_04751 | Not Available | Positive | 4399258 - 4399695 | 15730.9 |
| protein transport protein hofb | NCTC13639_04752 | Not Available | Positive | 4399705 - 4401048 | 49149.4 |
| type iv pilin biogenesis protein | NCTC13639_04753 | Not Available | Positive | 4401078 - 4402280 | 44442.9 |
| guanosine 5'-monophosphate oxidoreductase | NCTC13639_04754 | Not Available | Negative | 4402337 - 4403380 | 37203.7 |
| dephospho-coa kinase | NCTC13639_04755 | Not Available | Positive | 4403697 - 4404227 | 20027.0 |
| protein of uncharacterised function (duf1342) | NCTC13639_04756 | Not Available | Positive | 4404227 - 4404970 | 28345.2 |
| zinc-binding protein | NCTC13639_04757 | Not Available | Positive | 4404980 - 4405174 | 7232.4 |
| nucleoside triphosphate pyrophosphohydrolase | NCTC13639_04758 | Not Available | Negative | 4405263 - 4405652 | 14668.4 |
| preprotein translocase subunit seca | NCTC13639_04760 | Not Available | Negative | 4405782 - 4408415 | 99378.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

