Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide acetyltransferase | NCTC13639_04739 | Not Available | Negative | 4385229 - 4387118 | 65672.1 |
| pyruvate dehydrogenase subunit e1 | NCTC13639_04740 | Not Available | Negative | 4387133 - 4389796 | 99634.0 |
| transcriptional regulator pdhr | NCTC13639_04742 | Not Available | Negative | 4389960 - 4390724 | 29320.1 |
| aromatic amino acid transporter | NCTC13639_04743 | Not Available | Positive | 4391292 - 4392662 | 49452.7 |
| iscro1 transposase a | NCTC13639_04744 | Not Available | Positive | 4392837 - 4393232 | 14676.9 |
| is2 transposase tnpb | NCTC13639_04745 | Not Available | Positive | 4393190 - 4394071 | 33390.5 |
| symporter | NCTC13639_04746 | Not Available | Positive | 4394171 - 4395577 | 52968.7 |
| glycosyl hydrolase | NCTC13639_04747 | Not Available | Positive | 4395577 - 4396527 | 36574.7 |
| regulatory protein ampe | NCTC13639_04748 | Not Available | Negative | 4396620 - 4397474 | 32112.8 |
| n-acetyl-anhydromuranmyl-l-alanine amidase | NCTC13639_04749 | Not Available | Negative | 4397471 - 4398034 | 20864.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

