Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein, puls/outs family | NCTC13639_04729 | Not Available | Positive | 4376239 - 4376625 | 14364.3 |
| uncharacterised protein family (upf0231) | NCTC13639_04730 | Not Available | Negative | 4376659 - 4377021 | 13995.3 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | NCTC13639_04731 | Not Available | Negative | 4377196 - 4379118 | 69120.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | NCTC13639_04732 | Not Available | Negative | 4379145 - 4379516 | 13547.1 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | NCTC13639_04733 | Not Available | Negative | 4379530 - 4379793 | 9364.36 |
| protein of uncharacterised function (duf3300) | NCTC13639_04734 | Not Available | Positive | 4380242 - 4381834 | 58318.8 |
| protein of uncharacterised function (duf2950) | NCTC13639_04735 | Not Available | Positive | 4381845 - 4382639 | 29102.1 |
| conjugal transfer surface exclusion protein trat | NCTC13639_04736 | Not Available | Negative | 4382703 - 4383242 | 18744.3 |
| conjugal transfer surface exclusion protein trat | NCTC13639_04737 | Not Available | Negative | 4383250 - 4383435 | 6780.61 |
| dihydrolipoamide dehydrogenase | NCTC13639_04738 | Not Available | Negative | 4383629 - 4385053 | 50556.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

