Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | NCTC13639_04709 | Not Available | Positive | 4358811 - 4359482 | 23599.6 |
| pantoate--beta-alanine ligase | NCTC13639_04710 | Not Available | Positive | 4359603 - 4360457 | 31778.8 |
| aspartate alpha-decarboxylase | NCTC13639_04711 | Not Available | Positive | 4360553 - 4360933 | 13887.5 |
| major fimbrial subunit | NCTC13639_04712 | Not Available | Positive | 4361217 - 4361822 | 20945.4 |
| putative chaperone protein ecpd | NCTC13639_04713 | Not Available | Positive | 4361903 - 4362646 | 27418.1 |
| putative outer membrane usher protein | NCTC13639_04714 | Not Available | Positive | 4362723 - 4363991 | 46581.5 |
| putative outer membrane usher protein | NCTC13639_04715 | Not Available | Positive | 4363960 - 4365321 | 48809.7 |
| putative fimbrial protein stkd | NCTC13639_04716 | Not Available | Positive | 4365350 - 4365922 | 19761.5 |
| putative fimbrial protein stae | NCTC13639_04717 | Not Available | Positive | 4365949 - 4366512 | 18918.6 |
| putative fimbrial protein staf | NCTC13639_04718 | Not Available | Positive | 4366526 - 4367116 | 20952.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

