Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(a) polymerase | NCTC13639_04699 | Not Available | Positive | 4348936 - 4350300 | 52646.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihyropteridine pyrophosphokinase | NCTC13639_04700 | Not Available | Positive | 4350297 - 4350776 | 17841.4 |
| putative fimbrial protein staa | NCTC13639_04701 | Not Available | Positive | 4351452 - 4352039 | 20224.7 |
| putative chaperone protein ecpd | NCTC13639_04702 | Not Available | Positive | 4352107 - 4352850 | 27024.4 |
| putative outer membrane usher protein | NCTC13639_04703 | Not Available | Positive | 4352880 - 4355483 | 95177.9 |
| putative fimbrial protein stad | NCTC13639_04704 | Not Available | Positive | 4355500 - 4356072 | 20331.0 |
| putative fimbrial protein stae | NCTC13639_04705 | Not Available | Positive | 4356089 - 4356679 | 20011.7 |
| putative fimbrial protein staf | NCTC13639_04706 | Not Available | Positive | 4356686 - 4357261 | 20469.0 |
| putative fimbrial-like adhesin protein | NCTC13639_04707 | Not Available | Positive | 4357296 - 4358354 | 37493.1 |
| putative fimbrial-like adhesin protein | NCTC13639_04708 | Not Available | Positive | 4358311 - 4358574 | 9628.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

