Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial usher protein fimd | NCTC13639_04689 | Not Available | Negative | 4337438 - 4338499 | 38506.5 |
| fimbrial chaperone protein fimc | NCTC13639_04690 | Not Available | Negative | 4338888 - 4339601 | 26422.9 |
| fimbrial subunit | NCTC13639_04691 | Not Available | Negative | 4339652 - 4340194 | 18950.2 |
| uncharacterised protein | NCTC13639_04692 | Not Available | Negative | 4340450 - 4340650 | 8155.66 |
| penicillin-binding protein 1b | NCTC13639_04693 | Not Available | Negative | 4340761 - 4343298 | 94436.2 |
| atp-dependent rna helicase hrpb | NCTC13639_04694 | Not Available | Negative | 4343476 - 4345905 | 89203.3 |
| 2'-5' rna ligase | NCTC13639_04695 | Not Available | Positive | 4346016 - 4346510 | 18296.1 |
| sugar fermentation stimulation protein a | NCTC13639_04696 | Not Available | Positive | 4346526 - 4347230 | 26006.2 |
| dosage-dependent dnak suppressor protein | NCTC13639_04697 | Not Available | Positive | 4347408 - 4347938 | 20660.2 |
| glutamyl-q trna(asp) synthetase | NCTC13639_04698 | Not Available | Positive | 4347935 - 4348831 | 33891.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

