Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted membrane protein | NCTC13639_04679 | Not Available | Positive | 4325008 - 4325631 | 22074.1 |
| iron-binding protein (iron-sulfur cluster assembly protein) | NCTC13639_04680 | Not Available | Negative | 4325751 - 4326095 | 12070.1 |
| chloride channel protein | NCTC13639_04681 | Not Available | Negative | 4326177 - 4327598 | 50189.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | NCTC13639_04682 | Not Available | Positive | 4327767 - 4329047 | 45428.7 |
| iron-hydroxamate transporter permease subunit | NCTC13639_04683 | Not Available | Negative | 4329162 - 4331144 | 70218.3 |
| ferrichrome-binding periplasmic protein | NCTC13639_04684 | Not Available | Negative | 4331141 - 4332031 | 33129.2 |
| iron-hydroxamate transporter atp-binding subunit | NCTC13639_04685 | Not Available | Negative | 4332031 - 4332828 | 29045.4 |
| ferrichrome-iron tonb-dependent receptor | NCTC13639_04686 | Not Available | Negative | 4332875 - 4335124 | 82331.5 |
| s-fimbrillin | NCTC13639_04687 | Not Available | Negative | 4335335 - 4336219 | 31762.8 |
| fimbrial usher protein fimd | NCTC13639_04688 | Not Available | Negative | 4336372 - 4337298 | 33333.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

