Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | NCTC13639_04668 | Not Available | Negative | 4312941 - 4313666 | 26804.2 |
| methionine aminopeptidase | NCTC13639_04670 | Not Available | Positive | 4313991 - 4314785 | 29212.3 |
| pii uridylyl-transferase | NCTC13639_04671 | Not Available | Positive | 4314899 - 4317571 | 102460.0 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | NCTC13639_04672 | Not Available | Positive | 4317603 - 4318427 | 29878.8 |
| protein of uncharacterised function (duf3461) | NCTC13639_04673 | Not Available | Positive | 4318537 - 4318923 | 15083.0 |
| carbohydrate diacid transcriptional activator cdar | NCTC13639_04674 | Not Available | Negative | 4319010 - 4320167 | 43669.2 |
| serine endoprotease | NCTC13639_04675 | Not Available | Negative | 4320315 - 4321748 | 49450.6 |
| deoxyguanosinetriphosphate triphosphohydrolase | NCTC13639_04676 | Not Available | Negative | 4321878 - 4323395 | 59411.0 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | NCTC13639_04677 | Not Available | Positive | 4323479 - 4324177 | 24302.5 |
| vitamin b12-transporter protein btuf | NCTC13639_04678 | Not Available | Positive | 4324170 - 4324970 | 29097.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

