Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | NCTC13639_04658 | Not Available | Negative | 4301808 - 4302833 | 35966.5 |
| chaperone protein | NCTC13639_04659 | Not Available | Negative | 4302837 - 4303322 | 17685.2 |
| outer membrane protein assembly factor yaet | NCTC13639_04660 | Not Available | Negative | 4303445 - 4305868 | 89719.6 |
| zinc metallopeptidase rsep | NCTC13639_04661 | Not Available | Negative | 4305898 - 4307250 | 49216.3 |
| cdp-diglyceride synthase | NCTC13639_04662 | Not Available | Negative | 4307262 - 4308119 | 31457.6 |
| udp pyrophosphate synthetase | NCTC13639_04663 | Not Available | Negative | 4308132 - 4308890 | 28421.8 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | NCTC13639_04664 | Not Available | Negative | 4309078 - 4310274 | 43422.5 |
| ribosome recycling factor | NCTC13639_04665 | Not Available | Negative | 4310385 - 4310942 | 20551.6 |
| uridylate kinase | NCTC13639_04666 | Not Available | Negative | 4311082 - 4311807 | 25984.9 |
| elongation factor ts | NCTC13639_04667 | Not Available | Negative | 4311953 - 4312804 | 30401.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

